Wildlife

The Little Sioux River watershed, stretching across northwest Iowa, supports an exceptional diversity of wildlife thanks to its blend of prairie, wetland, savanna, and woodland habitats. This ecological richness reflects the river’s winding path from glacially carved uplands through forested valleys to fertile lowlands.

Historically, large grazers such as bison and elk shaped the region’s prairies, maintaining open grasslands and influencing plant and animal diversity. Today, prairie remnants and restored wetlands continue to provide critical habitat for pollinators, grassland birds, and native plants that once dominated the landscape.

A small Bison herd is managed by the O’Brien County Conservation Board at the Prairie Heritage Center just west of Peterson Iowa.

Together, the Little Sioux River watershed remains one of Iowa’s most ecologically significant regions—an enduring refuge for wildlife amid the surrounding agricultural landscape.

Wildlife of the Prairies

Beavers, muskrats, and deer are common along the riverbanks, where beavers build dens and dams to maintain water depth. Paddlers encounter abundant birdlife, including meadowlarks, bobolinks, red-winged blackbirds, pheasants, killdeer, sandpipers, and yellowthroats. Waterfowl such as mallards, blue-winged teal, and Canada geese nest nearby. Rare black terns may be seen in northern reaches.

Common Yellowthroat (Geothlypis trichas)

Wildlife of the Savannas

Southward, trees like cottonwood, silver maple, and bur oak appear, forming oak savannas once shaped by bison, elk, and fire. Shrubs such as wild plum and dogwood provide food and cover for birds and small mammals. Red-headed woodpeckers, bluebirds, kestrels, kingbirds, and flickers typify these habitats. Other species include wild turkeys and brown-headed cowbirds, the latter known for laying eggs in other birds’ nests.

Eastern Bluebird (Sialia sialis)

Swallows and kingfishers nest along eroded riverbanks—bank and rough-winged swallows dig tunnels in soil, while tree, barn, and cliff swallows use trees, bridges, and structures. Belted kingfishers nest in long bank tunnels and fish skillfully from perches. Foxes, coyotes, and deer frequent the surrounding hillsides.

Red Fox (Vulpes vulpes)

Wildlife of the Woodlands

From Spencer to Cherokee, the river passes through narrow and wider woodlands with oak, walnut, hackberry, maple, and basswood trees. These forests host squirrels, raccoons, mink, deer, and beavers, as well as a wide variety of birds. Common species include great blue and green herons, wood ducks, bald eagles, red-tailed and Cooper’s hawks, barred and great horned owls, and turkey vultures. Smaller songbirds such as wrens, orioles, chickadees, warblers, and vireos fill the canopy with sound.

White Tail Deer (Odocoileus virginianus)

Great Blue Heron (Ardea herodias)

Great Horned Owl (Bubo virginianus)

Semi- Aquatic Wildlife

The Little Sioux River watershed provides habitat for a diversity of amphibians, aquatic mammals and reptiles. Wetlands, Oxbows and tributaries like Waterman Creek, Dugout Creek, and Elk Creek provide an interconnected web of essential aquatic habitat for life to flourish within the watershed. Beaver, Muskrat, Mink and the elusive River Otter populate the muddy banks along with Softshell, Painted, Snapping and Blandings Turtles. Amphibians include the Northern Leopard Frog, the American Toad, the Chorus Frog and the Tiger Salamander. The Northern Prairie Skink and Garter Snakes are also plentiful.

Painted Turtle (Chrysemys picta)

A pair of Great Plains Toads (Anaxyrus cognatus)

North American Beaver (Castor canadensis)

Insects

The Little Sioux River watershed supports a wide variety of insect life, reflecting its diverse habitats — from prairie grasslands and wetlands to riparian forests and agricultural lands. Insects play crucial roles in the region’s ecosystems as pollinators, decomposers, prey species, and indicators of water quality.

Aquatic Insects:
Streams, ponds, and wetlands host rich communities of aquatic insects such as mayflies, caddisflies, stoneflies, dragonflies, damselflies, and aquatic beetles. These species are vital for nutrient cycling and serve as food for fish, amphibians, and birds. The presence of pollution-sensitive species like mayflies and caddisflies often indicates good water quality, while their absence can signal habitat degradation.

Common Whitetail Dragonfly (Plathemis lydia)

Terrestrial Insects:
On land, butterflies, bees, wasps, grasshoppers, beetles, and ants dominate the prairie and woodland edges. Native bees and butterflies, including monarchs, are especially important pollinators for native plants and crops. Grasshoppers and crickets are abundant in summer, providing food for birds and small mammals.

A Brief Ichthyological History

Over the past 130 years, fish research in the Little Sioux River basin has centered on the Iowa Great Lakes (West Okoboji, East Okoboji, and Big Spirit)—some of Iowa’s deepest and most biologically rich waters. Beginning with Seth Meek’s 1890 surveys, thousands of studies have been conducted, and modern monitoring continues through the Iowa DNR’s BioNet database, managed with the State Hygienic Laboratory’s long-term fish and macroinvertebrate sampling program.

The basin’s high fish diversity results from four key factors:

  • The Okoboji lakes serve as stable habitats and source areas for sensitive fish species.

  • The glacial landscape of the Des Moines Lobe provides clear, low-gradient streams and lakes that support diverse aquatic life.

  • Glacial gravels and cobbles in the upper and middle basin create varied habitats that support additional fish species.

  • Periodic flood connections between the Little Sioux and Des Moines River basins historically allowed species exchange, further enriching diversity.

Human actions also shaped the basin’s fish communities. From the 1870s to mid-1900s, Iowa’s “Mississippi Fish Rescue” program relocated fish from flooded Mississippi backwaters to inland lakes and rivers using special railcars like the “Hawkeye.” This likely introduced species such as Paddlefish, Bowfin, and American Eel to the Iowa Great Lakes and the Little Sioux basin.

The Little Sioux watershed is highlighted in tan. The Mississippi - Missouri divide is marked in red.

The ‘Hawkeye’ rail car was used to transport fish from the Mississippi backwaters to the Iowa Great Lakes and Little Sioux River in the late 19th and early 20th century.

Types of Fish

The Little Sioux River basin in northwest Iowa is the largest and most fish-diverse of the state’s western and southern river systems draining into the Missouri River. Since the 1890s, surveys have recorded 64 fish species from 19 families, with minnows being the most numerous group (20 species). The sucker and catfish families each include six species, while the sunfish family—which features Largemouth and Smallmouth Bass as well as White and Black Crappies—includes eight. Of the 64 total species, 54 are currently known or likely to inhabit the Little Sioux River and its tributaries.

*(the following list does not include all species of fish found in the Little Sioux River, but at least one from each family or genus)*

Common Fish Species

Fish Species of Greatest Conservation Need

Fish Species No Longer Found

Freshwater Mussels

Freshwater mussels are bivalve mollusks (like clams and oysters) with two shells connected by a hinge. They move slowly using a muscular “foot,” which allows them to burrow into riverbeds, anchor themselves, or slowly crawl along the substrate.

Their life cycle is complex: males release sperm into the water, which females take in to fertilize eggs in special gill chambers. The larvae, called glochidia, must attach to a host fish’s gills or fins, where they live temporarily as harmless parasites while transforming into juvenile mussels. Once mature, they detach and settle into the riverbed, anchoring themselves with fine byssal threads until strong enough to stay in place.

The Life Cycle of Freshwater Mussels

Some mussel species are host generalists, using many fish species, while others are host specialists that depend on just one or a few hosts and have evolved strategies to attract them.

Mussels play a crucial ecological role as filter feeders, cleaning 12–36 gallons of water per day and serving as indicators of water quality. They also stabilize riverbeds, create habitat for other organisms, and provide food and shelter for wildlife such as muskrats, raccoons, otters, and certain fish. Empty shells become microhabitats and egg-laying sites, further supporting aquatic biodiversity.

The most common freshwater mussel in the Little Sioux River is the Plains Pocketbook Mussel (Lampsilis cardium) Male (left) Female (right)

The most unusual river resident is the Deertoe Mussel (Truncilla truncata). Except for a small population in the Little Sioux River, it is only found in the southeastern part of Iowa. It uses Freshwater Drum as a fish host, so some drum with Deertoe glochidia must have made their way up the Missouri River, all the way from eastern Missouri, and gone up into the Little Sioux.

Historically, there were more than 20 mussel species in the Little Sioux River watershed. Now there are only 12 species found alive. In addition to the two mentioned previously, they are Giant Floater (Pyganodon grandis), Cylindrical Papershell (Anodontoides ferussacianus), White Heelsplitter (Lasmigona complanata), Mapleleaf (Quadrula quadrula), Pimpleback (Cyclonaias pustulosa), Fragile Papershell (Potamilus fragilis), Pink Papershell (Potamilus ohioensis), Lilliput (Toxolasma parvum) Pondmussel, (Sagittunio subrostratus), and Fatmucket (Lampsilis siliquoidea).

A map of Freshwater Mussel sampling efforts on the Little Sioux River.

Freshwater mussels are the most endangered group of animals in North America, mainly due to habitat loss and poor water quality. They thrive in stable, rocky or sandy riverbeds, but over a century of intensive agriculture has filled Iowa’s rivers with silt, degrading their habitat. Stream straightening and dams further harm mussels by blocking fish movement and creating unstable, silty pools. Mussels are also highly sensitive to ammonia pollution. Despite these challenges—along with droughts and floods—some mussel populations in the Little Sioux River continue to survive and even thrive.